Finally we tried an HLMP6000 LED with a 499 ohm resistor under it in place of the 1.27K. This was quiet and seemed to help the bass a bit.
I recently tried something similar to this - two HLMP6000's in series under the cathodes. I would think the result would be about the same as the LED and resistor in series, and my observations concur with yours: better bass and cleaner sound (though not a huge difference).
All in all this was a nice sprucing up of the S.E.X. amp, and it really makes for an interesting comparison with a Speedballed Crack. I would say the Crack exhibits the classic OTL plusses of super quick and natural sound and it sounds really tight and punchy with high impedance cans, while the S.E.X. has more of the classic SE qualities of liquid mids and highs, more "3Dness" (better image width and sense of stage depth) and great bass performance with low impedance headphones.
Couldn't agree more, esp. since I have the S.E.X. and Crack amps in the same room and have compared them side-by-side. I'm running mine with the aforementioned LED mod, just a regular resistor load on the driver plate (I like the extra distortion, it would seem), the MQ iron upgrade, and .1uf/2.2uF Clarity Caps. I do think you should try out CFB with gapped irons sometime - I think it makes the S.E.X. sound even more nuanced and helps unveil the deepest parts of the soundstage. I've not made this a permanent mod, though.
You have some great products!